Center-Authored Papers

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Bull, ME, Learn GH, McElhone S, Hitti J, Lockhart D, Holte S, Dragavon J, Coombs RW, Mullins JI, Frenkel LM.  2009.  Monotypic human immunodeficiency virus type 1 genotypes across the uterine cervix and in blood suggest proliferation of cells with provirus.. Journal of virology. 83(12):6020-8. Abstract
Bull, M, Learn G, Genowati I, McKernan J, Hitti J, Lockhart D, Tapia K, Holte S, Dragavon J, Coombs R et al..  2009.  Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations.. PloS one. 4(9):e7122. Abstract
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Coronado, GD, Holte S, Vigoren E, Griffith WC, Barr DB, Faustman E, Thompson B.  2011.  Organophosphate pesticide exposure and residential proximity to nearby fields: evidence for the drift pathway.. Journal of occupational and environmental medicine / American College of Occupational and Environmental Medicine. 53(8):884-91. Abstract
Coronado, GD, Holte SE, Vigoren EM, Griffith WC, Barr DB, Faustman EM, Thompson B.  2012.  Do Workplace and Home Protective Practices Protect Farm Workers? Findings From the "For Healthy Kids" Study. Journal of occupational and environmental medicine / American College of Occupational and Environmental Medicine. 54(9):1163-1169. Abstract
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Graham, SM, Holte SE, Dragavon JA, Ramko KM, Mandaliya KN, McClelland SR, Peshu NM, Sanders EJ, Krieger JN, Coombs RW.  2012.  HIV-1 RNA may decline more slowly in semen than in blood following initiation of efavirenz-based antiretroviral therapy.. PloS one. 7(8):e43086. Abstract
Graham, SM, Holte S, Kimata JT, Wener MH, Overbaugh J.  2009.  A decrease in albumin in early SIV infection is related to viral pathogenicity.. AIDS research and human retroviruses. 25(4):433-40. Abstract
Gwamaka, M, Kurtis JD, Sorensen BE, Holte S, Morrison R, Mutabingwa TK, Fried M, Duffy PE.  2012.  Iron Deficiency Protects Against Severe Plasmodium falciparum Malaria and Death in Young Children.. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 54(8):1137-44. Abstract
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Hecht, FM, Wellman R, Busch MP, Pilcher CD, Norris PJ, Margolick JB, Collier AC, Little SJ, Markowitz M, Routy J-P et al..  2011.  Identifying the Early Post-HIV Antibody Seroconversion Period.. The Journal of infectious diseases. 204(4):526-533. Abstract
Holte, SE, Randolph TW, Ding J, Tien J, McClelland RS, Baeten JM, Overbaugh J.  2012.  Efficient use of longitudinal CD4 counts and viral load measures in survival analysis.. Statistics in medicine. Abstract
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Liu, Y, Holte S, Rao U, McClure J, Konopa P, Swain VJ, Lanxon-Cookson E, Kim M, Chen L, Mullins JI.  2012.  A sensitive real-time PCR based assay to estimate the impact of amino acid substitutions on the competitive replication fitness of human immunodeficiency virus type 1 in cell culture.. Journal of virological methods. Abstract
Liu, Y, McNevin JP, Holte S, McElrath MJ, Mullins JI.  2011.  Dynamics of viral evolution and CTL responses in HIV-1 infection.. PloS one. 6(1):e15639. Abstract
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Mei, Y, Wang L, Holte SE.  2008.  A comparison of methods for determining HIV viral set point.. Statistics in medicine. 27(1):121-39. Abstract
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Püschel, K, Coronado G, Soto G, Gonzalez K, Martinez J, Holte S, Thompson B.  2010.  Strategies for increasing mammography screening in primary care in Chile: results of a randomized clinical trial.. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. 19(9):2254-61. Abstract
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Scott, J, Holte S, Urban T, Burgess C, Coppel E, Wang C, Corey L, McHutchison J, Goldstein D.  2011.  IL28B genotype effects during early treatment with peginterferon and ribavirin in difficult-to-treat hepatitis C virus infection.. The Journal of infectious diseases. 204(3):419-25. Abstract
Slyker, JA, Chung MH, Lehman DA, Kiarie J, Kinuthia J, Holte S, Tapia K, Njiri F, Overbaugh J, John-Stewart G.  2012.  Incidence and correlates of HIV-1 RNA detection in the breast milk of women receiving HAART for the prevention of HIV-1 transmission.. PloS one. 7(1):e29777. Abstract
Stekler, J, Sycks BJ, Holte S, Maenza J, Stevens CE, Dragavon J, Collier AC, Coombs RW.  2008.  HIV dynamics in seminal plasma during primary HIV infection.. AIDS research and human retroviruses. 24(10):1269-74. Abstract
Stekler, JD, Ellis GM, Carlsson J, Eilers B, Holte S, Maenza J, Stevens CE, Collier AC, Frenkel LM.  2011.  Prevalence and Impact of Minority Variant Drug Resistance Mutations in Primary HIV-1 Infection.. PloS one. 6(12):e28952. Abstract
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Tegger, MK, Crane HM, Tapia KA, Uldall KK, Holte SE, Kitahata MM.  2008.  The effect of mental illness, substance use, and treatment for depression on the initiation of highly active antiretroviral therapy among HIV-infected individuals.. AIDS patient care and STDs. 22(3):233-43. Abstract
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Voronin, Y, Holte S, Overbaugh J, Emerman M.  2009.  Genetic drift of HIV populations in culture.. PLoS genetics. 5(3):e1000431. Abstract
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Wang, CC, Cook L, Tapia KA, Holte S, Krows M, Bagabag A, Santos A, Corey L, Jerome KR.  2011.  Cervicovaginal shedding of hepatitis C viral RNA is associated with the presence of menstrual or other blood in cervicovaginal fluids.. Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology. 50(1):4-7. Abstract