Center-Authored Papers

Browse: Authors | Keywords | All Center-Authored Publications
Filter by Division: Basic | Clinical | Human Biology | PHS | VIDD (2010-present) | VIDI (2008-2009)
Filter by Year: 2008 | 2009 | 2010 | 2011 | 2012 | 2013

Filters: Author is Ruzzo, Walter L  [Clear All Filters]
B
Bar, M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM et al..  2008.  MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries.. Stem cells (Dayton, Ohio). 26(10):2496-505. Abstract
Bolouri, H, Ruzzo WL.  2012.  Integration of 198 ChIP-seq Datasets Reveals Human cis-Regulatory Regions.. Journal of computational biology : a journal of computational molecular cell biology. 19(9):989-97. Abstract
C
Cao, Y, Yao Z, Sarkar D, Lawrence M, Sanchez GJ, Parker MH, MacQuarrie KL, Davison J, Morgan MT, Ruzzo WL et al..  2010.  Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming.. Developmental cell. 18(4):662-74. Abstract
F
Fong, AP, Yao Z, Zhong JW, Cao Y, Ruzzo WL, Gentleman RC, Tapscott SJ.  2012.  Genetic and epigenetic determinants of neurogenesis and myogenesis.. Developmental cell. 22(4):721-35. Abstract
G
Geng, LN, Yao Z, Snider L, Fong AP, Cech JN, Young JM, van der Maarel SM, Ruzzo WL, Gentleman RC, Tawil R et al..  2012.  DUX4 Activates Germline Genes, Retroelements, and Immune Mediators: Implications for Facioscapulohumeral Dystrophy.. Developmental cell. 22(1):38-51. Abstract
J
Jones, DC, Ruzzo WL, Peng X, Katze MG.  2012.  A new approach to bias correction in RNA-Seq.. Bioinformatics (Oxford, England). 28(7):921-928. Abstract
Jones, DC, Ruzzo WL, Peng X, Katze MG.  2012.  Compression of next-generation sequencing reads aided by highly efficient de novo assembly.. Nucleic acids research. Abstract
K
Knouf, EC, Garg K, Arroyo JD, Correa Y, Sarkar D, Parkin RK, Wurz K, O'Briant KC, Godwin AK, Urban ND et al..  2012.  An integrative genomic approach identifies p73 and p63 as activators of miR-200 microRNA family transcription.. Nucleic acids research. 40(2):499-510. Abstract
S
Seemann, SE, Sunkin S, Hawrylycz M, Ruzzo WL, Gorodkin J.  2012.  Transcripts with in silico predicted RNA structure are enriched everywhere in the mouse brain.. BMC genomics. 13(1):214. Abstract
Y
Yao, Z, Fong AP, Cao Y, Ruzzo WL, Gentleman RC, Tapscott SJ.  2013.  Comparison of endogenous and overexpressed MyoD shows enhanced binding of physiologically bound sites.. Skeletal muscle. 3(1):8. Abstract