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Critical assessment of automated flow cytometry data analysis techniques.. Nature methods. 10(3):228-38.. 2013.
B cells with high side scatter parameter by flow cytometry correlate with inferior survival in diffuse large B-cell lymphoma.. American journal of clinical pathology. 137(5):805-14.. 2012.
On-line changepoint detection and parameter estimation with application to genomic data. Statistics and Computing. 22(2):579-595.. 2012.
Therapeutic Vaccination Expands and Improves the Function of the HIV-Specific Memory T-Cell Repertoire.. The Journal of infectious diseases.. 2013.
Global Panel of HIV-1 Env Reference Strains for Standardized Assessments of Vaccine-Elicited Neutralizing Antibodies.. Journal of virology. 88(5):2489-507.. 2014.
Highly multiplexed quantitation of gene expression on single cells.. Journal of immunological methods. 391(1-2):133-45.. 2013.
Mixture models for single-cell assays with applications to vaccine studies.. Biostatistics (Oxford, England).. 2013.
QUAliFiER: An automated pipeline for quality assessment of gated flow cytometry data.. BMC bioinformatics. 13(1):252.. 2012.
High-throughput flow cytometry data normalization for clinical trials.. Cytometry. Part A : the journal of the International Society for Analytical Cytology.. 2013.
Optimizing transformations for automated, high throughput analysis of flow cytometry data.. BMC bioinformatics. 11:546.. 2010.
Analysis of HLAA*02 association with vaccine efficacy in the RV144 HIV-1 vaccine trial.. Journal of virology.. 2014.
Comparability and reproducibility of biomedical data.. Briefings in bioinformatics.. 2012.
A computational framework for the analysis of peptide microarray antibody binding data with application to HIV vaccine profiling.. Journal of immunological methods.. 2013.
iBMQ: a R/Bioconductor package for integrated Bayesian modeling of eQTL data.. Bioinformatics (Oxford, England).. 2013.
The Thai Phase III HIV Type 1 Vaccine Trial (RV144) Regimen Induces Antibodies That Target Conserved Regions Within the V2 Loop of gp120.. AIDS research and human retroviruses. 28(11):1444-57.. 2012.
Flexible mixture modeling via the multivariate t distribution with the Box-Cox transformation: an alternative to the skew-t distribution.. Statistics and computing. 22(1):33-52.. 2012.
Modeling Bi-modality Improves Characterization of Cell Cycle on Gene Expression in Single Cells.. PLoS computational biology. 10(7):e1003696.. 2014.
An Integrated Hierarchical Bayesian Model for Multivariate eQTL Mapping.. Statistical applications in genetics and molecular biology. 11(4). 2012.
PING 2.0: an R/Bioconductor package for nucleosome positioning using next-generation sequencing data.. Bioinformatics (Oxford, England). 29(16):2049-50.. 2013.
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